This is a record of our Dynamics of Cells and Tissues (DynoCaTs) journal club. This follows the dePace lab format. We start the discussion by going round the table and each person says in a few sentences what they liked and didn’t like about the paper/preprint, and one point for discussion, which is written on the board. After we get all the way round, we vote on the topics to prioritize them. We’ve found this format to work well for our group.
26/03/21 - Alex - Saez et al (2021). A quantitative landscape of cell fate transitions identifies principles of cellular decision-making. DOI
19/03/21 - Eman - Wigbers et al (2020). Flow induced symmetry breaking in a conceptual polarity model. DOI
05/03/21 - Alex - Seminars, workshops and conferences of interest Slides
26/02/21 - Aydar - Research talk.
19/02/21 - Alex - Stanoev et al (2021). Robustness and timing of cellular differentiation through population-based symmetry breaking. DOI
12/02/21 - Ian - Fattah et al. Neuroepithelial organoid patterning is mediated by Wnt-driven Turing mechanism. DOI
04/12/21 - Aydar - Devany et al (2020). Cell cycle-dependent active stress drives epithelia remodeling. DOI (now published in PNAS)
06/11/20 - Stan - McGuirl et al (2020). Topological data analysis of zebrafish patterns. DOI
23/10/20 - Ian - Herrera-Delgado et al (2020). Tractable nonlinear memory functions as a tool to capture and explain dynamical behaviors. DOI
11/09/20 - Alex - Stern et al (2020). Template-based mapping of dynamic motifs in tissue morphogenesis. [DOI] (https://doi.org/10.1371/journal.pcbi.1008049)
03/09/20 - Ian - Rozman et al (2020). Collective cell mechanics of epithelial shells with organoid-like morphologies. DOI
29/07/20 - Ian - Rosenbauer et al. (2020) Modeling of Wnt-mediated tissue patterning in vertebrate embryogenesis. DOI
20/07/20 - Priya - Scott et al (2020). A hybrid model of intercellular tension and cell–matrix mechanical interactions in a multicellular geometry. DOI
06/07/20 - Eman - Chandrasekaran & Bose (2019). Percolation in a reduced equilibrium model of planar cell polarity. DOI
23/06/20 - Alex - Dokmegang et al (2020). Computational modelling unveils how epiblast remodelling and positioning rely on trophectoderm morphogenesis during mouse implantation. DOI
15/06/20 - Aydar - Grewe & Schwarz (2020). Mechanosensitive self-assembly of myosin II minifilaments. DOI
08/06/20 - Ian - García-Morales et al (2019). Dynamic Hh signalling can generate temporal information during tissue patterning. DOI
01/06/20 - Eman - Yu et al (2020). Frizzled-dependent planar cell polarity without decreted Wnt ligands. DOI
27/06/20 - Larra - Kumar et al (2020). Heterophilic cell–cell adhesion of atypical cadherins Fat and Dachsous regulate epithelial cell size dynamics during Drosophila thorax morphogenesis. DOI
18/05/20 - Stan - Holmes et al (2017). Gene expression noise enhances robust organization of the early mammalian blastocyst. DOI
11/05/20 - Priya - Cerchiari et al (2015). A strategy for tissue self-organization that is robust to cellular heterogeneity and plasticity. DOI
04/05/20 - Ian - Browning et al (2020). Identifying density-dependent interactions in collective cell behaviour. DOI
27/04/20 - Aydar - Dye et al (2020). Self-organized patterning of cell morphology via mechanosensitive feedback. DOI
06/04/20 - Alex - Chiou et al (2018). Principles that govern competition or co-existence in Rho-GTPase driven polarization. DOI
25/03/20 - Priya - research talk
09/03/20 - Aydar - research talk
24/02/20 - Ian - research talk
10/02/20 - Larra - research talk
18/11/20 - Larra - Kong et al (2019). Experimental validation of force inference in epithelia from cell to tissue scale. DOI
28/10/19 - Ian - Guerrero et al (2020). Neuronal differentiation influences progenitor arrangement in the vertebrate neuroepithelium. DOI
07/10/19 - Alex - research talk